Sentence examples for alignment panel of from inspiring English sources

As an example, the match of clone 2M11 (gi #s 38262078 and 38262180) with F. graminearum scaffold 1.52 is shown in the sequence alignment panel of Figure 2. The 5' match was in two fragments, (181/230 bp, 1e-; 95/119 bp, 8e-) around bp position 3,347,394 (3.347 on the map).

Malin provides a feature-rich graphical user interface for the analysis tasks. Figure 1 gives an example of an alignment panel, where, in order to build an intron table, the user selects the conservation criteria (such as the minimum number of gapless positions next to an intron site) for discerning homologous sites in a set of multiple alignments.

The BLAST-based alignment panel in Fig.  1 demonstrates a good PASC result where the bars of different colors group together and the groups are well separated.

The Alignment panel, shows the alignment belonging to the selected entry, color coded according to the hydrophobicity of the amino acids included in the alignment.

A Tree panel and an Alignment panel are also displayed to the right in the Tree view.

At the end of the alignment (Panels A and B) a black line marks the end of the protein including the peptide.

We then ran a profile-profile comparison using the HHPRED program with a HMM derived from the ALOG domain alignment against a panel of HMMs derived using PDB structures as search seeds.

This alignment, illustrated in the left panel of Figure 4, correctly aligns the dense sub-network from yeast to the dense sub-network of human.

Primers were designed based on initial sequence alignments gained from a trial panel of 25 individual herbarium specimens [see additional file 3 - Table S1].

Left marginal mode alignments may only be extended by aligning left residues x i (central panel of Fig. 2), and right marginal mode alignments may only be extended by aligning right residues x j (center right panel of Fig. 2).

(D ) Alignments of GP1 sequences from a panel of filoviruses.