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In particular, CONREAL [ 10] gives an alignment overview for two sequences only.
TOPALi can quickly render alignments facilitating quality checks: the alignment overview shows the relative position of the zoomed region to the full alignment.
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Core features include keyboard and mouse-based editing, multiple views and alignment overviews, and linked structure display with Jmol.
Fig. 3 Alignment pipeline overview.
To enable the user to further analyze the results generated from PathoProT, download options for the BLAST alignment result (.txt), overview of virulence genes (.txt) and the Heat Map (.pdf) are provided.
A Bio::Graphics-driven alignment graph provides an overview of the queries, any hits and their respective scores.
An overview on alignment software packages freely or commercially available can be found in a recent review by Katajamaa et al. [ 6].
Tabulated overviews of alignment media are given in Prestegard et al. and Tolman and Ruan.
In this article, an overview of the alignment system is first presented.
An overview of the alignment strategy is presented in Figure S2.
An overview of this alignment reveals three major alterations in the amino acidic sequence of LiTXN3 relative to formerly characterized TXNs.
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