The phrase "alignment overlap" is correct and usable in written English.
It can be used in contexts related to coordination, agreement, or compatibility between different elements or systems.
Example: "The alignment overlap between the two projects ensures that resources are utilized efficiently."
Alternatives: "congruence" or "alignment intersection".
Within Genlight, we defined orthologs as best reciprocal blastp hits with a minimum of 70% sequence alignment overlap and an E-value of 0.01 or smaller.
The sequence alignment overlap and the E-value cut off can be preset in accordance with the goal of the experiment [21], [29].
Reads with no alignment overlap with other reads are denoted as singletons.
Biological evidence includes transcript overlap (spliced or un-spliced), peptide hit, protein homolog alignment overlap, or InterPro domain presence.
We used a low BLAST identity filter of 95%, and a required sequence alignment overlap of 60% of minimum sequence length.
Two hundred and seventy putative orthologs with at least 300-bp alignment overlap among these taxa by reciprocal best blast hits (supplementary table S1, Supplementary Material online).
At this point, NY 3 rejoined its previous alignment, overlapping NY 425 up to Cambria Wilson Road, where that route split off and continued to the north.
When a trimmed, probe set consensus sequence alignment overlaps with one or more mRNAs in a group, the probe set is then considered to interrogate the same gene region or transcriptional unit as defined by the mRNAs' pattern of alignment.
When their ORF alignment overlapped, multiple ESTs were considered as derived from a single gene and resolved to a single representative EST.
Non-poly(A/T -tailed ESTs were used A/T -tailedng ESTsence for novel transcript variant expression if their chromosome alignment overlapped were poly(A/T)-tailed ESTs.
An alignment is said to match a query to a coding region if the subject portion of the alignment overlaps the coding region and is on the same strand.
