The phrase "alignment options" is correct and usable in written English.
It can be used in contexts where you are discussing different ways to align elements, such as text, images, or objects in design or layout settings.
Example: "In the document editor, you can choose from various alignment options to position your text properly."
Alternatives: "alignment settings" or "alignment choices".
Nucleotide sequences of the 16S rRNA gene as well as nucleotide and amino acid sequences of the HSP were downloaded from GenBank databases (except for the Bx-62986 isolate) and aligned using the multiple alignment options in CLUSTAL followed by minor manual adjustments.
Bowtie267 (v2.2.4) was then used to align reads to reference genomes using the default, paired-end alignment options and including the singleton reads.
Raw reads were aligned to a pseudometagenome (see small RNA methods) using Tophat v2.0.8 alignment options –read-mismatches 10 –edit-distance 12.
This provides a risk-based method of determining channel project depth based on two ship loading conditions for the three channel alignment options.
Optional features include the choice of highlight color, alignment options, an icon to display with the link, and open in a new window and allowing search engines to follow the link.
Figure 1 Most important alignment options for linking accent commands with underlying syllables.
The separate alignment option aligns all sequences against different references separately in a run.
The iterative alignment option aligns sequences against the reference sequences in a pre-determined order.
Hexons genes from the HAdV-D genomes were aligned using ClustalW [50] alignment option available in the MEGA 4 program [51].
Sequences were organized into five separate data matrices using Mesquite 2.72 [ 34], and each aligned with the accurate alignment option (E-INS-i) in MAFFT 6.7 [ 35- 37] under default parameters.
Subsequently, these alignments were aligned using the profile-profile alignment option in MUSCLE.
