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(ii) SEM image showing SWCNTs alignment onto strip-patterned substrate by dip-coating process.
The pump light beam alignment onto the same spot as the IR light beam is done with two mirrors.
Contigs which were found to have an alignment onto the reference at least 50 bp shorter than their actual length were then examined using BLASTZ [29].
Read alignment onto a reference genome is a prominent example of this sort.
Given two sequences with a homolog in PDB, one can accurately superpose the PDB structures (templates) and map the resulting alignment onto the original sequences.
The use of the RRL approach has enhanced read usefulness and assisted in addressing some of the computational challenges for alignment onto a reference sequence.
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A number of methods are presented that allow the automated projection of information derived from individual structures or from the comparison of multi-structure alignments onto a graphical representation of the sequence alignment.
For comparing outputs between Mugsy, Mauve, TBA, comparisons were restricted to completed genomes to simplify projecting pairwise alignments onto a reference coordinate system.
Annotation was carried out by projecting protein-coding gene models from three-spined stickleback through the whole genome alignments onto the re-ordered cod genomic regions.
By mapping sequence alignments onto X-ray crystal structures we have shown that the PPARα contact residues for the PPARα/γ co-agonist aleglitazar are fully conserved between human and minipig, but different to rodents for three amino acids.
The high rate (84%) of validated SNPs was consistent with 93% alignments onto the reference genome with 100% (25/25) or 96% (24/25) identities (Table 2), indicating that QualitySNP, a haplotype-based SNP mining algorithm and pipeline, is a very reliable tool to identify true EST SNPs, and it can effectively minimize the false discovery rate even without quality files.
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