Sentence examples for alignment on which from inspiring English sources

The 41st parallel survey, only a partial investigation, sketched the alignment on which was to be built the first transcontinental railroad, the Union Pacific east of Great Salt Lake and the Central Pacific west thereof.

The protein alignment on which this tree is based is provided in Figure 3 source data 1.

bLength of alignment on which the 16S rDNA inserted sequence and the corresponding sequence in the database are similar.

Each observation can be weighted with a score reflecting the expected accuracy of the alignment on which the observation was made.

This, yet unpublished, binary format allows each ExaML process to concurrently read only those parts of the alignment on which it will be computing likelihoods.

From this multiple alignment, on which 767,738 sites without polymorphisms and 2189 distinct patterns were found, a tree was inferred by maximum likelihood using PhyML [ 48], with 100 bootstrap replicates.

The ten alignments on which gap patterns were based contained exactly 60 sequences, so one sequence in the gap pattern was used, without replacement, as the template for one sequence in the experimental alignment.

Another limitation is that sequence variation, especially in non-transcribed sequence, often impedes the alignments on which the analysis depends, thereby reducing sample size and power [6], [7].

The method performances are very close on the 71 alignments on which Rate4Site completed successfully (ROC analysis shows INTREPID has a small but statistically significant edge over Rate4Site on this dataset).

The protein sequences of these conserved regions (detailed in Additional Files 1, 2, 3, 4, 5, 6 and 7) have been used to obtain the alignments on which this study is based.

Sequences with a higher amount of nucleotide differences and sequences with very close genetic relationships to other than the indicated species were not considered valid and were not used for the alignments on which species identification of parasites were based.