The phrase "alignment of translated" is not complete and lacks clarity in written English.
It can be used in contexts discussing the coordination or agreement of translated materials or texts, but it needs additional context to be fully understood.
Example: "The alignment of translated documents is crucial for ensuring consistency across different languages."
Alternatives: "synchronization of translations" or "coordination of translated content".
An alignment of translated aa sequences is in Figure 4a.
An alignment of translated aa sequences from the four lipoproteins show that coding sequences have diverged (Figure 3 b).
Supplemental functional annotation was inferred through the alignment of translated sequences against active sites in Pfam using the HMM-based tool provided by Pfam [68].
GO categories were inferred for the core and auxiliary genes in strain M1 through the alignment of translated sequences against Uniprot meeting the similarity criterion of at least 50% identity covering at least 50% of both sequences.
These primers target nucleotide sequences corresponding to blocks of semi-conserved amino acids in an alignment of translated cooS genes found in sequenced bacterial genomes (GenBank) and cooS genes and gene fragments found in the metagenome of a Nasutitermes sp. hindgut community [16].
This method relies on an alignment of translated transcripts to homologous proteins to estimate the physiochemical constraints at positions in the protein.
Protein alignments of translated cassette-encoded genes as well as intI sequences and their homologs from the NCBI database were generated using ClustalW [47] and manually edited to remove ambiguous positions.
Functional categories for the core and auxiliary genomes for C. jejuni M1 were inferred through alignments of translated sequences against UniProtKB and the results were summarized in Figure 4.
In addition, Figure S2, S3, S4, S5, S6 show evolution of in vivo Gag mutations in five other acutely infected subjects, and Figures S7 and S8 show alignments of translated amino acids for two acutely infected subjects, D-5018 and E-3430, respectively.
To compare intron-exon structures of Meis across animal lineages, we mapped intron positions onto alignments of translated coding sequences.
For multiple alignments of translated amino acid OR sequences, the program FFT-NS-I nested in Mafft version 5 (Katoh et al. 2005) was used with default parameters.
