The phrase "alignment of the obtained" is not entirely clear and may not be the best choice in written English.
It could be used in contexts discussing the arrangement or organization of results or data that have been acquired or obtained.
Example: "The alignment of the obtained results is crucial for the accuracy of our analysis."
Alternatives: "organization of the results" or "arrangement of the acquired data."
The alignment of the obtained sequences was the basis for the design of 11 species-specific reverse primers located in the 16S rRNA gene region.
The alignment of the obtained sequences was the basis for the specific design of species-specific reverse primers (ITSArSil-R, ITSDir-R, and ITSMa-R) located in the ITS-1 region.
Alignment of the obtained amino acid sequence (blastp) to other PepP sequences showed 99% amino acid sequence identity to Lactococcus lactis ssp.
By alignment of the obtained sequences to the TPH2 mRNA reference sequence (GenBank NM_173353), we detected multiple SNPs in nearly all TPH2 exons (Figure 1A; Table S1).
The alignment of the obtained sequences was conducted using ClustalW [ 38].
Multiple alignment of the obtained cDNA fragments provided a selected interacting domain (SID), efficiently narrowing the epitope-containing region.
Using the Multalin tool (http://prodes toulouse.inra.fr/multalin/[ 77]) with default parameters, we performed multiple sequence alignments on the obtained sequences of the MYB domains.
Alignments of the obtained allele sequences (protein level) were performed using the ClustalW option [79] and manually edited.
All structural alignments of the obtained GSK-3β conformations with other kinases were done using Multiprot (49).
The alignments of the obtained Ganoderma lucidum ITS sequences indicated similarities between the strains ranging from 95.3 to 100% (data not shown).
Gene conversion was detected using GENECONV [ 37] http://www.math.wustl.edu/~sawyer/geneconv/ within alignments of the obtained haplotypes by all paralogs.
