The phrase "alignment of the complete" is not standard and may be unclear in written English.
It could be used in contexts discussing the alignment of a complete set of items or ideas, but it lacks specificity.
Example: "The alignment of the complete data set is crucial for accurate analysis."
Alternatives: "alignment of the whole" or "alignment of the entirety".
However, across the entire bPBP family, several members have noncanonical secondary structure topologies, which indicates that a structure alignment of the complete family would be even less conserved.
A Bayesian phylogeny based on the nucleotide alignment of the complete ABCB family was constructed using MrBayes [39].
A multiple sequence alignment of the complete plasmid sequences was created with the Mauve software [59] using a progressive alignment including seed families to increase sensitivity.
A phylogenetic tree was constructed from a sequence alignment of the complete genome nt sequences of the prototype members of the nine APMV serotypes (Fig. 4a).
The total length of the alignment of the complete data set was 4434 bp.
However the alignment of the complete set of sequences may not be consistent.
2 Sequence similarity based on alignments of the complete sequences Additional gene fragments were identified 5' of the GI conserved region.
Multiple alignments of the complete gene sequences for each selected gene were performed individually using ClustalW [ 33] with default parameters.
japonica cpDNAs were identified through alignments of the complete genome sequences against themselves via Basic Local Alignment Search Tool 2 sequences at the National Center for Biotechnology Information (http://blast.ncbi.nlm.nih.gov/).nih.gov/
However, in the process of ordering the DM reference sequences [ 18], we have also had a close look at sequence tag alignments of the complete RH BAC physical map to the DM reference chromosomes.
Multiple alignments of the complete amino acid sequence from the three human class V myosin members were performed, by means of the ClustalW program, version 1.81 (Supplementary Figure S1-A).
