Sentence examples for alignment of the blocks from inspiring English sources

Also, Cy3-anti-biotin antibody spots were also printed in each corner and used for proper alignment of the blocks.

This resulted in an alignment of the blocks on the multiple sequence alignment generated with the query sequence, each block having a particular score.

Always use the spacers to maintain the alignment of the blocks.

So far, we have considered only the alignment of the conserved blocks that could be identified reliably, which cover less than 50% of the total alignment.

This indicates that the correct alignment of the core blocks corresponds to a local maximum in the alignment landscape.

The optimal alignment of the read blocks and is obtained with the help of the familiar Needleman Wunsch algorithm.

In order to test whether deepBlockAlign can reliably distinguish different classes of structured RNAs, we performed an all-against-all alignment of the 455 block groups from the benchmark dataset.

The co-linear blocks of the 3 genomes were determined using BLASTn, and the alignment within each of the blocks was based on the Mauve method [63], with a seed length set to 11.

We then performed an alignment of the previously defined blocks (seed alignment) with the query multiple sequence alignment using a dynamic programming algorithm.

We investigated how many anchor points were necessary to enforce a correct alignment of the three core blocks in this test example.

We further refined the alignments of the syntenic blocks using t-coffee (Notredame et al. 2000) and analyzed them with GRIMM v. 1.04 (Tesler 2002) and UniMoG (Hilker et al. 2012) to infer a minimal history of rearrangements among the aligned genomes.