Sentence examples for alignment of structural from inspiring English sources

Here we are concerned with alignment of structural RNAs, using models that consider both primary sequence and secondary structure constraints.

Among them, structural conservation was calculated based on the alignment of structural neighbors (See details in section 2.2). 25 proteins were discarded because no structures neighbors were found.

In a detailed alignment of structural predictions, all maize PSTOL-like proteins shared conserved ATP-binding and serine/threonine protein kinase domains with OsPSTOL1 (Additional file 3: Figure S2).

GSATools comprises the g_sa_encode program to encode a protein trajectory into an alignment of structural strings and to perform basic statistical analysis, and the g_sa_analyze program to perform correlation analysis.

The latter observation indicates that in a typical TCS, where HK phosphorylates its cognate RR, the unphosphorylated HK interacts with its cognate RR and that lack of interaction between GraR and GraS may be due to an improper alignment of structural elements in the DHp region known to determine the interaction between HK and its cognate RR.

The functionally important sites were determined by the mapping of ligand binding residues on the structural alignment of the available structural members.

Over two experiments we develop two instructional analogies using a combination of structural alignment, progressive alignment, and hierarchical alignment.

Vorolign compares two protein structures and produces a structural alignment of the two structures and an associated alignment score.

The two family alignments were aligned using a structural alignment of the two protein structures.

Peptide [Y91]MBP83 99 gave the best cytokine and antibody profile and constitutes a promising candidate peptide for immunotherapy of MS. Structural alignment of existing crystal structures revealed the peptide binding motif of I-As.

The RMSD values of structural alignment between these structures from different NMR experiments are very large.