Sentence examples for alignment of proteins from inspiring English sources

13568_2011_22_MOESM1_ESM.PDF Additional file 1: Alignment of proteins of the glycoside hydrolase family 32 (GH32) subfamilies from yeast species.

Additionally, the alignment of proteins gradually took place, in which an ordered network could be formed during setting.

The DALI method has also been used to construct a database known as FSSP (Fold classification based on Structure-Structure alignment of Proteins, or Families of Structurally Similar Proteins) in which all known protein structures are aligned with each other to determine their structural neighbors and fold classification.

Multiple sequence alignment of proteins was carried out using parallel implementation of ClustalW-MPI version 0.13 [24].

Whereas the cladogram in Fig. 1 is based on alignment of proteins, we used gene names for clarity.

In 1991, Sander and Schneider used Shannon entropy derived scores for positional conservation in alignment of proteins [12].

Extended Data Fig. 4 Alignment of protein sequences of haemagglutinins from different subtypes of IAV.

Local alignment of protein sequences was done using the FASTA suite (http://fasta.bioch.virginia.edu/fasta_www2/fasta_down.shtml).shtml

Extended Data Fig. 8 Alignment of protein sequences of surface MHC-II α-chains from different species.

Lassmann, T., Frings, O. & Sonnhammer, E. L. Kalign2: high-performance multiple alignment of protein and nucleotide sequences allowing external features.

Extended Data Fig. 9 Alignment of protein sequences of surface MHC-II β-chains from different species.