Sentence examples for alignment of potential from inspiring English sources

We chose the 18-bp sequence based on alignment of potential BNIP3 binding sites identified in the DR5 promoters, and these oligonucleotide probe was incubated with recombinant BNIP3 proteins.

A set of simulated alignments, i.e. 26 alignments with length around 100,000 bps are also generated according to the frequency and the conservation of the nucleotides in the alignment of potential non-exons.

Read alignments of potential V2R contigs were manually corrected for long homopolymer errors introduced by Roche/454 pyrosequencing.

characTErizer.pl requires two files to classify the insertion sites, the first listing the locations of all nonreference insertions (determined by flankers) and the second containing alignments of potential spanners to the genome.

Putative miRNA targets were identified based on the total numbers of mismatched nucleotides between miRNAs and the alignment structures of potential targets.

Out of the two sets, 5,000 alignments of clearly orthologous exons and 20,000 alignments of potential-non exons were used as training data and the rest were used as test data in [ 15].

Alignment of the potential paralogues and their orthologues was performed using the GUIDANCE web tool [ 66].

Primers are identified by scoring the alignment of each potential primer to the read and choosing the best match.

A multiple sequence alignment of 606 potential AMPs was used to calculate a matrix with the genetic distances for each pair of the sequences.

Sequence alignment of these potential phosphorylation sites of C. albicans Rfa2 with RPA2 in human, mouse, frog and zebrafish revealed little homology.

The study of how search software is used in the experimental protocol, especially for how sequence alignment and locations of potential tryptic cleavage sites (highlighted by the HIP2 interface) influence peptide detection, can now be directly addressed by the proteomics community.