Sentence examples for alignment of pattern from inspiring English sources

Results: Here, we present a scoring system called ALPS (alignment of pattern matrices score) that only uses primary information from a deep sequencing experiment, i.e. the relative positions and lengths of reads, to classify ncRNAs.

Our method ALPS (alignment of pattern matrices score) allows to detect miRNAs and other known ncRNA classes with high accuracy and due to its unbiased nature, it also provides a straight-forward way to discover and classify novel ncRNAs.

Note that the sub-pixel alignment performed here is conceptually slightly different from the intra-block alignment of patterns, as we do not want to optimize a similarity measures with respect to a certain reference pattern here, but rather maximize the similarity of each pattern with respect to the others.

Images were normalized for lane to-lane differences in mobility by the alignment of patterns obtained on multiple loadings of the 1kb DNA size marker (GIBCO-BRL, Gaithersburg, MD, USA).

Therefore, in the fabrication of silicon-based MEMS structures using wet etching, a high precision alignment of mask pattern to crystal orientation is desirable in order to control the dimensions of fabricated structures.

Indeed, the re-plotting of our data with the time origin defined as light offset instead of light onset, revealed a clear alignment of gene patterns in the liver (Figure 2A).

Assortative mixing patterns suggest a propensity to the local alignment of behavioral patterns between connected nodes.

Moreover, 3-dimensional unit cell alignment of the patterns is illustrated.

Several studies have been performed for the precise alignment of mask patterns with respect to crystallographic directions on {110} and {100} silicon wafers [155-160].

The algorithm is easily modified for local alignment of read patterns by including the beginning of a new local alignment (with score 0) in the recursion (6), analogous to the Smith Waterman sequence alignment algorithm.

The analyses of this set of sequences included BLAST scores, multiple sequence alignment, examination of patterns of covariant residues, phylogenetic analysis and comparison of the sequences flanking the conserved Cys and His residues that attach the FeMo cofactor to NifD and that are also conserved in the alternative nitrogenases.