The phrase "alignment of outputs" is correct and usable in written English.
It can be used in contexts where you are discussing the consistency or agreement of results or products from a process or system.
Example: "The alignment of outputs from the new software has significantly improved our overall efficiency."
Alternatives: "consistency of results" or "congruence of outcomes".
Alignments of output contigs from those assemblies to the LSV2 genome assembled by PRICE are shown in Figure 2G.
The pipeline (Supplementary Fig. S1) begins by running NextClip, followed by alignment of the output files for the four categories using BWA.
Mugsy can align draft genome sequences and does not require a reference genome for calculating the alignment or interpretation of output.
From the alignment output of each genotype, we summarized the depth (frequency) of each nucleotide (A, G, C, or T) at each base position in each reference sequence.
According to the reported results of Ay et al. (2012), attaining considerable runtime efficiency could cost an accuracy loss of almost 50%, where accuracy is measured in terms of the Pearson's correlation coefficient between the alignment outputs of the compressed version and the original version of SubMAP.
In fact, we have used the alignment of the Rd.HMM search output to guide the alignment of the target sequence and the template sequence in the homology modeling and this strategy seems to have given good results.
A single wrong fragment accepted at an early stage of the greedy procedure can subsequently prevent many correct fragments from being included into the alignment, thereby leading to an output alignment of lower over-all quality and to instability.
Most methods use a well-defined objective function assigning numerical quality score to every possible output alignment of an input sequence set and try to find an optimal or near-optimal alignment according to this objective function.
For this purpose, the multiple sequence alignment output of the entire KLK homologous amino acid sequences analyzed in this study was used as input to the program to project the conservation grades of residues on the known three-dimensional structure of the human proKLK6 (PDB ID: 1gvl) [34].
The alignment output of sequence reads against the chicken reference genome was generated using SeqMap software [ 50] with the recommended ELAND3 output option, which was used as the input for proTRAC with default parameters (excluding minimum loci per cluster as 6, significance level of p ≤ 0.05 for increased hit density, and a minimum score of 1.3 for strand bias).
