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Currently, most studies that have characterized IF have focused on the permeability of ECM or shear stress distribution on the cells, but less is known about the prediction of shear stress on the individual fibers or fiber networks despite its significance in the alignment of matrix fibers and cells observed in fibrotic or wound tissues.
12, 13 It mediates the binding and alignment of matrix components during elastogenesis, and facilitates the assembly of complex matrix structures.
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The model also accurately described the dependence of SF alignment on matrix stretch magnitude.
However, the influence of fiber alignment on matrix elaboration in vivo remains to be fully explored.
Their system has also exhibited the sensitivity dependence for the alignment of receptor matrix in the specific direction.
We also evaluated the alignment quality of matrices and methods, which revealed that MIQS shows higher alignment sensitivity than that with the existing matrix series and CS-BLAST.
Results: Here, we present a scoring system called ALPS (alignment of pattern matrices score) that only uses primary information from a deep sequencing experiment, i.e. the relative positions and lengths of reads, to classify ncRNAs.
Our method ALPS (alignment of pattern matrices score) allows to detect miRNAs and other known ncRNA classes with high accuracy and due to its unbiased nature, it also provides a straight-forward way to discover and classify novel ncRNAs.
Alignment of matR sequences resulted in a matrix of 1776 sites, of which 732 (41%) were potentially parsimony-informative.
Selection on phenotypic traits indirectly generates such structuring within organisms, as it indirectly selects on genetic and mutational covariances to produce an alignment of the M-matrix, the G-matrix and the adaptive landscape (Reisinger and Miikkulainen 2006; Jones et al. 2007; Toussaint and von Seelen 2007).
These include alignment of reads, count matrix computation, and normalization.
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