Sentence examples for alignment of markers from inspiring English sources

Alignment of markers in the consensus map to the Pinus taeda genome assembly version 1.01 (Neale et al. 2014; Zimin et al. 2014) positioned 3305 scaffolds onto LGs.

Because amplification or alignment of markers was not equally possible for identical outgroup taxa from the available material, more than one species had to serve as outgroup.

Most of the P. Lilin linkage groups displayed figures of homologous chromosomes with alignment of markers along the NJ tree similar to that of Figure 3-A, even for PLG 3 which displayed skewed segregations.

For the NL population (N=393 birds), 6877 markers (mean informative meiosis±s.d.=224.6±94.4) were grouped into 32 putative great tit chromosomes based on the alignment of markers with the zebra finch genome.

Most of the groups (52) were anchored onto the G. raimondii draft genome sequence by alignment of markers, as well as by chromosome localization using deficiency mapping with F1 hypo-aneuploids and/or the presence of marker(s) that were previously linkage-mapped [ 14].

Adding EST- and BAC-based SNPs substantially increased comparative points defined by alignment of marker sequences against the human genome.

The order of the DG markers based on genetic analysis was identical to their predicted physical order across chromosomes based on alignment of marker sequences to the reference genome sequence with four exceptions (see below).

Fig. 2: Assessment of raw 10x assembly contigs compared to Hill et al.13 Capsicum frutescens × Capsicum annuum genetic map, shown for Chromosome 2. Filtered alignments of marker sequences for the four maps (Supplemental File 1) were utilized in the AllMaps software20 using a weighted approach to generate pseudomolecules with currently available genetic map information.

Physical positions were retrieved from a gff3 file that contains alignments of marker sequences to the tomato pseudo-molecules (http://solgenomics.net/itag/release/2.3/list_files/ITAG2.3_sgn_data.gff3).net/itag/release/2.3/list_files/ITAG2.3_sgn_data.gff3

In Figure 6, we present a sequential alignment of UPR markers with cell fate.

This indicated that most of the noise observed using the less stringent cutoff was from the unreliable alignment of SNP markers to M. truncatula reference genome.