The phrase "alignment of genome" is correct and usable in written English.
It can be used in contexts related to genetics, bioinformatics, or discussions about genetic sequencing and analysis.
Example: "The alignment of genome sequences is crucial for identifying evolutionary relationships among species."
Alternatives: "genomic alignment" or "alignment of genetic material".
The Mauve progressive multiple genome aligner was used to provide comparative alignment of genome features from L. erinacea, A. radiata and O. kenojei (16, 17).
For interactive alignment of genome sequences, BLAST26 was performed by ViroBLAST26, an independent web server for flexible queries of similar nucleotide and amino acid sequences.
ANI values were calculated based on pairwise alignment of genome stretches using the JSpecies software with BLAST algorithm [ 17].
The efficiency of the programs used for the alignment of genome sequences can strongly improve the process of selection of human-specific SNPs.
We then estimated evolutionary rates and divergence dates from an alignment of genome sequence dates with the isolates' recovery dates, by using BEAST V.1.7.4 (http://beast.bio.ed.ac.uk; see online supplementary methods).
We believe that the hybrid alignment of genome sequences and map is extremely essential because the analysis not only evaluates the accuracy of genome maps but also answer the question that to what extent can the whole-genome map facilitate the genome sequence super-scaffolding.
These characteristics open up the possibility of applying the proposed message-passing scheme to accurate probabilistic alignment of genome-scale sequences, which has not been possible using traditional pair-HMMs.
There are other tools that allow the user to do other things in addition to the alignment of genomes.
Multiple sequence alignment of genomes of representative CVA2 strain 430895 and other human enterovirus A strains was generated by using ClustalX version 2.0 and edited manually.
Multiple sequence alignment of genomes was carried out and phylogenetic tree was constructed using HKY+G+T substitution model at 1000 bootstrap replicates.
The phastCons score is computed as the posterior probability for a nucleotide to be conserved given a multiple alignment of genomes and their phylogenetic tree [ 72].
