Sentence examples for alignment of diverse from inspiring English sources

Sequence alignment of diverse papillomavirus types shows that C22 and C28 of HPV16 L2 are absolutely conserved throughout the Family Papillomaviridae (Fig. 1A), prompting us to further examine the role of these two cysteines in HPV infection.

We generated a multiple alignment of diverse Aspergillus genomes with an average pairwise sequence identity of 58%, which is close to the optimal level of sequence identity for searching for RNAs.

The primers, listed in the legend to Table 1, were designed using the full-length genome alignment of diverse group M HIV-1 strains from the HIV sequence database [2].

An alignment of diverse eukaryotic Rpn12 sequences defines 27 completely conserved residues (Supplementary Figure S2).

We propose that similar mechanosensitive actin filament assembly and disassembly may have general role in formation and alignment of diverse contractile actomyosin bundles in different cell-types.

While the unresolved nature of clade A could be ascribed to artifactual issues related to the alignment of diverse sequences in the trees presented in Figures  1 and 2, reconstruction of the 16S rRNA tree with only the Columbicola spp. clade A symbionts (resulting in a relatively unambiguous alignment) did not improve the resolution of the tree.

A Fortran library of algorithms (Par_Seq) has been designed and used in searching for the similarity of sequence motifs extracted from the multiple sequence alignments of diverse groups of proteins (query motifs) and the target motifs which are encoded in various genomes.

To examine these events on a wide scale of evolutionary distances we use the Conserved Domain Database (CDD) [ 23] that provides accurate domain alignments of diverse sequences.

For this we have used the BLOSUM 62 amino acid identity score, a measure of the probability of an amino acid remaining unchanged in an alignment block of diverse sequences with at least 62% identities (Henikoff S and Henikoff JG 1992).

A multiple alignment of 16 diverse G8R protein orthologs, created using T-Coffee [20] with manual editing, was used as input for the HHsearch tool [21], [22].

Sequence alignment of phylogenetically diverse sequences of Torsin.