Sentence examples for alignment number of from inspiring English sources

Number of links in original alignment, number of links in repeated alignment, number of links mutually included in both alignments and F-score.

All these observations are summarized in Additional file 8, where percent alignment, number of mismatches within the alignment and oligo alignment start position are plotted versus mean hybridization values and number of retained probes.

Although physiological structures such as spinal alignment, number of lumbar segments of the porcine spines are somewhat different from those of human cadaveric spines, however, animal spines are the most convenient choice to perform the experiment with long spinal segments on circumstance that human cadaveric spines can not be accessed.

LoQuM uses statistics on the read (base quality scores reported by the sequencer) and the alignment (number of matches, mismatches and deletions, mapping quality score returned by the alignment tool, if available, and number of mappings) as features for classification and uses simulated reads to learn a logistic regression model that relates these features to actual mapping quality.

We then derived various covariates from the probe-target alignment, including the alignment length, number of mismatches, bit score, E-value, predicted melting temperature, and alignment start and end positions.

- Length of alignment denotes number of aligned residues The table shows the alignment accuracy by RMSD, the length of alignment, and coverage, which is the fraction of the aligned residues in the target protein.

Table 2 Experimental results summary         Pairwise alignment Multi-view alignment Dataset Number of RI pairs Avg.

The objective function is specifically tuned to finding SV events by taking into account the length and quality of alignments, the number of alignments in the OCS and the genomic distance between those alignments.

As an attempt to test this fact, we first counted, for each alignment, the number of HomoloGene pairs in the alignment.

Using the alignment, the number of reads that aligned to each gene for each sample separately, were counted (in-house script), and used to produce the counts matrix.

All resulting alignments of NCIVs are sorted according to alignment size (number of matched NCIVs).