Sentence examples for alignment models from inspiring English sources

For profile alignment, we used HMMER 2.3.2 (Eddy, 2008) to build a profile HMM from the training alignment subset with hmmbuild using the -f option to build local alignment models, and aligned each test fragment to the profile (thereby adding it to the multiple alignment with the training sequences) with hmmalign using default parameters.

Statistical alignment models can be modified to simultaneously align sequences and detect functional elements.

Statistical Machine Translation (SMT) alignment models.

Speech-input translation can be properly approached as a pattern recognition problem by means of statistical alignment models and stochastic finite-state transducers.

Existing alignment models, while important for raising awareness of alignment issues, have provided little in the way of guidance for actually correcting misalignment and thus achieving alignment.

Existing vertical alignment models consider neither the side-slopes of the road nor the natural blocks like rivers, mountains, etc., in the construction area.

Expressed sequences are compared to the human genome to find high quality hits, and are then aligned to it using a spliced alignment model that allows long gaps, for modeling introns.

The map alignment model implemented by ARLEM allows that aligned units duplicate either to the left or to the right.

The modeling process involved several steps, such as targettemplate selection and alignment, model building, and model evaluation.

It involves fold assignment, sequence structure alignment, model building, and model evaluation.

An improved two-position initial alignment model for strapdown inertial navigation system is proposed.