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Thus, the resulting methods possess high sensitivity and good specificity.
As a hybrid, SARST was almost as precise as conventional PSC methods like CE in structural similarity searches while at the same time it possessed some properties of sequence alignment methods such as the high running speed [34].
To align genomes we used a combination of global and local alignment methods.
We aligned each test sequence fragment to the training alignment using four different local alignment methods.
Wallace, I.M., O′Sullivan, O., Higgins, D.G. & Notredame, C. M-combiningomultiplemultiple sequence alignment methods with T-Coffee.
Fiducial marker and hybrid alignment methods for single- and double-axis tomography.
A comprehensive benchmark study of multiple sequence alignment methods: current challenges and future perspectives.
Table 2 Brief comparison of different SiNWs alignment methods Alignment type Alignment method Inter-NW distance, alignment yield and control of NW density Merits Demerits References Langmuir Blodgett alignment Parallel alignment of SiNWs during uniaxial compression of Langmuir Blodgett trough 8 10 NW/mm; alignment yield is about 80 90 %.
Alignment methods should be flexible enough to utilize all available data, particularly with recent advancements in experimental separation methods.
Finally, Section "Face alignment" proposes two direct facial surface alignment methods inspired by the ordered structure of the ORF rings.
This alignment-free method is much faster than conventional multiple sequence alignment methods.
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