Sentence examples for alignment methods is from inspiring English sources

At the Drosophila-tephritid distance, the identification of orthologous non-coding DNA by standard alignment methods is ineffective.

On the other hand, the scoring system of the alignment methods is far from perfect.

This theoretical foundation for pairwise alignment methods is not inarguable, due to the fact that most similar gene sequences in different species are not always orthologs [ 4].

A shared feature of these peak alignment methods is that they rely on the occurrence of abundant peaks common to all samples.

A detailed discussion of the results obtained by ProBiS is provided in the case of biotin carboxylase and in the case of TATA-binding protein (TBP); the unique ability of ProBiS to detect and align similar binding sites in protein structures with different folds and to compare it with other global and local structural alignment methods is described.

If both alignment methods were able to align a molecule, and their aligned locations were similar (within half the length of the molecule), a consensus was reached, and we included the OMBlast result in our integrated list.

Different alignment methods were compared including the classic (PCA), normal PCA (NPCA), and our method.

The reconstructed images from cross-correlation and our alignment methods are shown in Figure 4.

Comparisons with state-of-the-art range-bin alignment methods are included and advantages of the proposal are highlighted.

Alignment methods are often impaired by "false predictions" caused by the ubiquitously present short sequences throughout the genome.

In this paper, the hardware and the software alignment are described, and the track-based alignment methods are explained in detail.