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Its complexity is linear to the number of sequence alignment matches generated by blast.
If a primary alignment matches the optimal alignment found by SSEARCH, it is a 'match'match
Local graph alignment matches nodes and edges to maximize the local alignment score.
A plot of these two values for training set 𝒯3 is shown in Figure 2. As seen in the figure, nearly complete coverage of base pairings and alignment matches can be retained when each sparsity factor is roughly 10.
Our data show that currently claimed nucleotide sequences in US patents cover at least 41% of existing genes, as identified by BLAST alignment matches, and as many as 100% when allowing for 15mers.
The majority of sequences in the alignment matches one of the alleles at one of these two informative sites but matches the other allele at the other informative site.
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Alignment, matching, and map computation between geometric data sets.
The eye sockets, cheek bones and jaw alignment matched.
Smith, C. A., Want, E. J., O'Maille, G., Abagyan, R. & Siuzdak, G. XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification.
They analyzed their results in the problems of image alignment, matching, and video tracking.
Reads not producing an alignment matching these criteria were excluded.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com