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DOI: http://dx.doi.org/10.7554/eLife.07578.002 10.7554/eLiFigure78.003 Figure 1 figure supplement 1. Group difference between phase alignment levels during successful vs unsuccessful encoding in the RATN.
Ignoring the total number of reads, the samples derived from transgenic and wild-type mice demonstrated similar alignment levels (Supplementary Table 1), an indication of the robustness of the method.
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Numerical experiments show that the lower bounds of the alignment probability are valid when they are used to estimate the size of the selected set as well as the expected alignment level.
According to their research, humanitarian clusters generally fall in to the "alignment level," i.e., organizations retain a high degree of independence but may adjust their activities to create a more effective response on the basis of activities of other organizations.
The position of World Bank as explorer also makes sense: the World Bank is a large organization which can coordinate a significant human and economic effort, however it is not traditionally thought of as a health provider, and thus has a lower alignment level with the community.
Additional quality control was carried out at alignment level based on the alignment quality control concept described in [ 25].
The optical map results describe two categories of global alignments, either 'restrictive' (level 1) or 'permissive' (level 2), and one category of local alignment (level 3).
The differences between the TP and FN at the alignment level are summarized as a heatmap (Additional file 7).
Therefore, the number of sequences in the alignment, level of sequence divergence and new introduced filters warranted minimizing false positives rate and increasing accuracy of our results.
Navigation between views is supported and provides Sybil with the unique ability to explore from the whole genome level to the protein and nucleotide multiple sequence alignment level without leaving the application.
Track geometry parameters are track gauge, alignment, longitudinal level, cant (cross level), and twist.
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