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Exact(26)
Second, aligning divergent sequences is difficult, and the alignment itself can create a strong phylogenetic bias.
In addition to this new type of alignment itself, we also describe a dynamic programming algorithm that computes a best syntenic global alignment of two sequences, as well as its related score.
This however is difficult without the information from the alignment itself.
In other words, the alignment itself has little effect on the homology estimation.
Most importantly, we confirmed that our method neither depends on the alignment itself, nor on the level of sequence identity.
This can be interpreted as additional evidence beyond the alignment itself, making it more likely that the mammalian hits are indeed homologs.
Similar(34)
It means that although TUIUIU* is a lossless filter, the end result may not correspond to the optimal alignment if the aligner itself is a heuristic, or if it is designed to optimise a scoring function different from the one the filter is made for.
Intra molecular distance ranges are used as shape descriptors and are pre-calculated by the application of the alignment machinery itself in an initialization stage.
At the junction with Ness Road, PA 402 turns northeast along the lakeshore, soon passing a junction with a former alignment of itself.
Through Preston Park, Route 370 intersects with an old alignment of itself twice before coming to the main intersection in town, the northern terminus of Route 247 (Creamton Drive) and its continuation Rabbit Run Road.
A glocal alignment by itself can be used for such purposes.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com