Sentence examples for alignment is extracted from inspiring English sources

Then, the longest conserved block from the alignment is extracted to form a pk model for each dataset.

A whole genome sequence alignment of the 12 C. trachomatis genomes was created using progressive Mauve [ 59, 60] and the core alignment was extracted by keeping only the regions where all genomes aligned over at least 500 bp.

The aligned scaffold region and 200 bp upstream from the start of the alignment were extracted.

The corresponding multiple species alignment was extracted using the Vertebrate Multiz Alignment & Conservation track [91] within the UCSC genome browser.

The alignment was extracted and the amount of data was compressed by scripts that identified unique sequence variants in forward and reverse direction and counted the number of reads per variant.

The protein sequences for alignment were extracted from NCBI.

Consensus sequences for each alignment were extracted with Consense program included in the EMBOSS package.

Only common regions to the retrieved and CENP-M proteins present in the alignment were extracted (∼140 amino acids).

The corresponding multiple species alignment was extracted using the Vertebrate Multiz Alignment & Conservation track [ 18] within the UCSC genome browser.

The presented alignment was extracted from a much larger alignment consisting of more than 40 Bub3 sequences from distant eukaryotes (Vleugel et al., 2012 ).

Additionally, the 12 18 amino acid stretch that matched in the alignment was extracted and used to build an HMM consisting solely of the conserved region.