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In Prefab, the reference alignment is defined as the portions of alignments consistently aligned by two structural aligners: CE (Shindyalov and Bourne, 1998) and DALI (Holm and Sander, 1995).
In addition, a false alignment is defined as a read that is aligned to other positions rather than the one from which it was generated.
Finally, the highway alignment is defined by means of a parametric cubic smoothing spline.
The degree of the alignment is defined by an order parameter 〈m〉, which is an average of 1/2 3cos2 θ - 1) over an ensemble of measured grains.
A good spliced alignment is defined as two extended fragments that could form a complete read.
The desired anatomic limb alignment is defined as 2 10° in the new KSS score [ 16, 17].
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2) " Do patient goals of care align among patient- caregiver and family physician triads?" Goal alignment was defined as concurrence on at least one goal by all three parties in a particular triad (i.e., patient, caregiver and family physician).
Satisfactory alignment was defined as <5° of angular deformity in either the coronal or sagittal planes [17].
The accuracy of alignment was defined by the gravure printer since the alignment was made manually without any additional registration system.
The alignment was defined as dataset 1.
Alignment was defined as concurrence on at least one goal.
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