The phrase "alignment introduced by" is correct and usable in written English.
It can be used when discussing the concept of alignment that has been established or created by a specific factor or entity.
Example: "The alignment introduced by the new policy has significantly improved team collaboration."
Alternatives: "alignment established by" or "alignment created by".
We estimate that 0.5% of our high confidence set of composite reads were mis-alignments introduced by SHERA.
To reduce the possibility that the initial EST test might have been affected by the alignment errors introduced by the methods in their mRNA alignments and repeated in the EST alignments, we repeated the test with an extra requirement that the set of introns must be the same in the mRNA alignments produced by every method.
In the spirit of classifying systematic alignment errors introduced by [48], we refer to this problem as gap dribble, since short alignments are dribbled along the large gap.
The optimization method that we introduced herein is inspired by the so-called progressive approach to multiple alignment introduced in the 1980s for the classical multiple-alignment problem [ 17].
In order to quantify the compatibility between the different cochleotopic maps we used an alignment index introduced by Sereno and Huang [3].
Tree alignments were introduced by Jiang et al. (1995) and can be applied for RNA secondary structure comparison (Le et al., 1989).
The gold standard for RNA alignment has been introduced by Sankoff (1985).
The nature of current RNA-Seq, resulting in short error prone reads, alignment artifacts, bias introduced by the library construction process etc., introduces noise into this already difficult problem.
The application of MI to sequence alignments was first introduced by Korber et al. as a means of identifying covarying sites in a viral peptide [2].
While the lack of alignment introduces possible errors in the inference of the actual evolutionary relationships among species, the lack of assembly primarily introduces sampling error caused by low genome coverage and sequencing errors [ 26, 29].
