Sentence examples for alignment into two from inspiring English sources

In a second approach, we considered the above mentioned diversity of JH agonist structures and split their common alignment into two separated alignments.

We therefore divided the RBB multiple alignment into two segments and re-analyzed the sequences located before and after the breakage site using PAML.

We next partition the alignment into two subalignments: one composed exclusively of the sites labeled " a", and one composed of the remaining sites, which we label " i" for isolated.

The BPPS procedure partitions a multiple sequence alignment into two, functionally divergent subgroups by identifying a pattern that is conserved in one of the subgroups (termed the foreground), but that is non-conserved in the other subgroup (termed the background).

We then split each alignment into two alignments of 10 sequences each and reconstructed phylogenetic trees for each of the resulting 300 alignments (100 original ones plus two halves for each; Figure 1) using the PhyML program (WAG evolutionary model, alpha parameter of gamma distribution set to 1) [ 10].

The LRS 10 results classified the highway alignment into three zones based on in situ relative density while the UK DCP software gives penetration index and CBR values of soil layers from the ground surface up to 1.5m depth.

Percentage mismatch was calculated as number of total mismatches/length of alignment into hundred.

To compensate for the rate heterogeneity in the data we divided the alignment into twelve partitions, each with its own individual GTR matrix, gamma distribution, proportion of invariable sites and base frequencies.

To calculate sequence variability, we divided the aa alignment into eight segments and computed pairwise identity among sequences with no missing data.

To further address the phylogenetic relationship within the obtained haplotypes, we restricted the alignment into three subsets, each comprising 18 haplotypes (10 haplotypes from Cx. annulirostris, 6 from Cx. palpalis and 2 from Cx. sitiens which served as an outgroup).

In order for this algorithm to work in a reasonable timeframe, we needed to split the multiple sequence alignment into four manageable segments, the largest of which had 17 mutations.