The phrase "alignment including a" is not complete and lacks context, making it difficult to assess its correctness in written English.
You can use it when discussing specific aspects of alignment in a broader context, but it needs additional information to clarify its meaning.
Example: "The project requires alignment including a focus on team collaboration and communication."
Alternatives: "alignment that encompasses" or "alignment featuring a".
Now, Route 24 ran along a new alignment, including a part which was supposed to be temporary.
Bootscanning infers phylogenetic trees using a sliding window along an alignment including a query sequence (the putative recombinant sequence) and putative parental (non-recombinant) sequences.
Since the average distance between two sequence positions is shorter in an alignment including a polymorphic indel, we expected a negative length effect of indels on recombination.
The RNAz algorithm uses the RNAfold and RNAalifold [24] programs to find the minimum free energy structure for each individual sequence in the alignment, as well as the minimum free energy of the consensus structure for the alignment, including a "covariance term" which takes into account compensatory and consistent mutations which preserve the RNA secondary structure.
Surprisingly, the BACH1 depletion resulted in disordered mitotic chromosome alignment, including a thicker mitotic chromosome plate, collapsed ring-like shape and oscillating chromosome axis.
One included 47 representatives from the broadest diversity of sequences available; this alignment including a partial sequence from Cyanophora (regions A-G).
The multiple sequence alignment included a selection of key myxosporean species with attention to select taxa from different host groups and those with different tissue tropisms to map the biology of the frog myxosporean species groups (see Material and methods; Table S4).
Parameters for the un-gapped alignment included a maximum of three mismatches permitted in the seed, suppression of alignments if more than one reportable alignment exists, and a 'try-hard' option to find valid alignments.
Genes showing quality alignments, including a start and stop codon and spanning the complete CDS region for N. crassa, were identified, yielding a total of 2,151 genes.
