Sentence examples for alignment included from inspiring English sources

This alignment included 25 dinoflagellate taxa, with 1,229 unambiguously aligned bases (Additional file 2).

Six predicted maize proteins with more than 55%% sequence identity to rice PSTOL1 were selected and aligned using ClustalX software version 1.83 [ 80]; the alignment included OsPSTOL1 and the Arabidopsis protein kinases SNC4 [ 81] and PRK5 [ 82].

Interestingly, the TBLASTN search using the P. sitchensis CLEL16 partial protein sequence (Additional file 3: Table S2), although not full-length, revealed that this gene also aligned with the same genomic scaffold as CLEL14, but the alignment included putative protein coding segments not found in CLEL14 mapping to a long segment in NCS1 that is not shared by CLEL14 and CLEL17.

The CO1 alignment included 3-bp indels in Fumontana and Equitius; these were manually aligned, guided by amino acid translations.

The alignment included endoglucanases from Serratia proteamaculans strain 568 (A8G820, A8G820_SERP5), S. liquefaciens (S5EHX1, S5EHX1_SERLI) and E. coli O157 (Q8X5L9, GUN_ECO57).

The alignment included 64 samples; 49 of Gracilaria salicornia from this study and 15 species of Gracilariaceae from GenBank, with 661 nucleotide positions.

Realistic 3D images of fibrous networks were prepared using sets with various degrees of alignment including nearly isotropic, nearly layered and moderately aligned networks.

Each aligned read was then consolidated into a single genomic alignment, including intronic splice gaps.

When the vertical alignment includes a tangent gradient, a profile sketch might be useful.

Based on the American Association of State Highways and Transportation Officials AASHTOO) soil classification systems soil along the proposed alignment includes A 2 4, A 2 6, A 2 7, A 7 5, A 7 6, and A 6 (at one location).

Based on the American Association of State Highways and Transportation Officials soil classification system, soil along the chosen highway alignment includes A 2 4, A 4, A 2 5, A 2 7, A 1(a), A 1(b), A 7 6 and A 6.