Sentence examples similar to alignment in house from inspiring English sources

To conserve the frame of the coding sequences, the nucleotide alignment is derived from the amino acid alignment (in-house script) of the translated products of the pseudogene and its cognate gene obtained by GENEWISE.

Amino acid sequences from segmentally or tandemly duplicated pairs were first aligned and then guided and transferred into a cDNA sequences alignment using in-house Perl scripts.

InDels were inferred from gaps in the Mauve alignment using in-house perl scripts.

The multiple sequence alignment of the corresponding coding sequence was performed according to a previous study (Vieira et al. 2007) by back-translating the amino acid alignment using in-house developed Perl scripts.

We measured the proportion of amino acid differences and indels in the protein alignments (translated from the previous nucleotide alignments) using in-house Perl scripts.

The corresponding nucleotide gene family datasets were aligning based on their protein alignments using in-house software.

We screened these 13 alignments with in-house C programs to look for single nucleotide (SNPs) and insertion deletion (indels) polymorphisms.

Routines for performing within- and between-gel alignment were developed in-house, as follows.

The derived protein alignments were re-edited into codon-based alignments using an in-house PERL script.

Subsequently, we obtained nucleotide coding sequence alignments based on the T-coffee protein alignments using an in-house Perl program.

Then, the protein alignments were re-edited into codon-based alignments using an in-house PERL script.