Suggestions(1)
Exact(2)
Overall, multiple sequence alignment has shown that they were homologous to each other and comprised conserved exon regions at two end positions and non-conserved or variable intron region in the middle.
11, 12 Structural alignment has shown that the second and third conserved glycines in the polypeptide of the ATP-binding loop G-2X-G-9X-G(S/T) in 1MJH are replaced by bulky amino acids glutamine and methionine in UspA.
Similar(58)
This protein multiple-alignment has shown that this peptide is 75.7% identical to the corresponding homologous protein in Danio rerio.
In addition, multiple sequence alignments have shown the specific conservation of this residue among the DNA polymerases that use a protein as primer.
Phylogenic analysis and multiple alignments have shown that both genes shared remarkably higher degree of structural conservation and sequence identities with other counterparts from invertebrates and vertebrates, further supporting that the two proteins were novel members of molecular chaperone family.
Multiple sequence alignments have shown that some bacterial γ-GTs, including that from Bacillus licheniformis (BlGT), possess an extra sequence at the C-terminal tail of the large subunit, whose role is unknown.
Genomic alignments have shown that the vast majority of intron positions in placental-specific domesticated genes are highly conserved.
Multiple alignments have shown that the ar/R filters of bacterial MIPs, TpMIP1, ToMIP2, and AaMIP3 differ from those found in the proteins from other subfamilies (Additional file 1).
Moreover, the alignments have showed that the sequence differences between plant and bacterial PSY are mainly found at the N terminus due to the presence of a signal peptide responsible for the localization of these enzymes in chloroplasts and chromoplasts (Cunningham and Gantt 1998).
The set of alignment parameters has shown a significant impact on the population of sequencing reads identified as endogenous by BWA.
Although TS-AMIR did not yield a highly accurate alignment like TM-align, it has shown a competitive accuracy with CE which is known to be a highly accurate method.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com