Sentence examples for alignment graphics from inspiring English sources

Alignment graphics were generated with UGENE (Okonechnikov et al. 2012).

The parameters comprised SNV coverage of >10, variant probability of 75%, and ploidy set at 1. SNVs were subsequently subjected to a final manual review of the alignment graphics versus the variant calls for the nine genomes.

In addition to tabulated alignments, graphic alignments were generated and grouped in three tiers: 1) viral gene annotation, 2) viral transcriptomes, and 3) viral proteomes (legends of Figure 1 and Figure 2).

Effects of alignment were not consistent with existing theories, with right-aligned graphics being preferred.

All alignments are displayed using Bioedit Sequence Alignment Editor graphic display [ 87].

The graphic alignment tool for comparative sequence analysis (GATA) was used to align the sequences and visualize the results [ 88].

To check the homology at Scaffold level we used GATA, a graphic alignment tool for comparative sequence analysis [ 17].

Dynamic Time Warping (DTW) is an algorithm to align temporal sequences with possible local non-linear distortions, and has been widely applied to audio, video and graphics data alignments.

A Bio::Graphics-driven alignment graph provides an overview of the queries, any hits and their respective scores.

Cy3 (gProcessedSignal) and Cy5 (rProcessedSignal) values were used to calculate log ratios; these values were used for all graphic alignments.

All sequence-based backbone alignments were preformed using the molecular graphics program, Friend [74] and structure-based alignments were achieved with the Calpha-based algorithm, Topofit [75], also present in Friend.