The phrase "alignment generating" is correct and usable in written English.
It can be used in contexts related to creating or establishing alignment, often in discussions about strategies, processes, or systems.
Example: "The team focused on alignment generating activities to ensure everyone was on the same page before the project kickoff."
Alternatives: "alignment creation" or "alignment establishment".
Final assembling of each aligned group was performed using profile alignment generating a final dataset of 6,244 sites.
Initially, the sequences were subjected to Clustal W multiple sequence alignment generating a consensus sequence (Figure 4A).
In the case of Feuda et al. (2012) data set, all the ctenophoran opsins identified by Schnitzler et al. (2012) and the cnidarian opsins identified by Mason et al. (2012) in the acroporan A. palmata were added to the alignment (generating FEAm1).
The HoT column score (or residue score) is the fraction of identical aligned columns (or paired residues that are identical) between the "Heads" alignment, generated from the original sequences, and the "Tails" alignment, generated from the reversed sequences.
The rooted tree is based on a multiple sequence alignment generated with the program Mega6.
First, a multiple sequence alignment generated by Buzko and Shokat [1] was adopted and binding site residues were identified.
Comparison by multiple sequence alignment generated a dendrogram, revealing the phylogenetic relationships of CrGSTs with other well-characterized GST classes.
The coevolved mutation analysis by PSICOV using multiple sequence alignment generated by PSI-BLAST and machine learning-based algorithm outputs are combined to generate the final predictions.
The alignment generated many gaps.
The target-template alignment generated by MODELLER agreed with the secondary structure alignment (Supplementary Fig. S1A).
The alignment generated with ClustalW was submitted to the ConSurf website server (http://Consurf.tau.ac.il) [25].
