Sentence examples for alignment frequency of from inspiring English sources

Sequences were interrogated with respect to alignment, frequency of sequence recurrence and the presence of any Alu sequences.

The distribution profile of the identities for these 6,295 alignments was presented in Additional file 2: Figure S1, which showed an approximately uniform distribution within the interval of 0.90-0.98 whilexhibitingng a sharp increase in alignment frequency within the interval of 0.98-0.99.

If invariant and variant sites distributed randomly in the original alignment, the frequency of invariant sequences in the permuted alignments would show similar frequency to the original alignment because of the randomness at the start point.

Allele frequency bias: In comparison to mapping with global alignment, the frequency of the reference allele was on average 3% higher when a local alignment was used.

The observed value of zero stop codons per alignment had a frequency of 0.007 in the parametric simulations under no selection for ORF maintenance.

Second, if a given polymorphic site in the alignment showed a frequency of N higher than 10%, then it was excluded from the analysis.

In order to define the first, we summarized short read alignment-derived frequencies of the parental allele at all type-1 and type-2 marker positions.

Highest order polynomial coefficients of singular vectors (eigenvectors) are utilized as square error to obtain a compact decomposition based on phase alignment of frequency samples.

The probability that an alignment would have complete ORFs by chance was determined from the frequency of alignments with complete ORFs in the parametric simulation.

Lutz and Gutmann (1995)'s method for lineament identification (Two Point Azimuth: TPA) is based on the azimuth between each sample and every other sample and provides a distribution of the frequency of alignment angles, usually presented within groups of 10° intervals (Connor 1990; Wadge and Cross 1988).

Data for comparing the frequency of alignment gaps and mismatches (i.e. gaps per kbp and mismatch per kbp) in different de novo assemblies were generated with bootstrap resampling (n = 1,000) using MATLAB.