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In contrast, the elliptical boundary results show ~ 50%% more alignments than would be expected for random points within the elliptical field (Fig. 5b, the difference in vent-vent alignment frequency for the thick black line representing vents, and the grey lines representing significance bounds).
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Order parameters were calculated (Fig. 7E) and multi-comparison testing indicated that 1) there were significant differences (p<0.05) in order parameter for each frequency for both cell types (alignment at 1Hz>0.1Hz>0.01Hz); and 2) stress fiber alignment was significantly higher in FAK-null MEFs at the sub-threshold frequency of 0.1 Hz, although the difference was not remarkable.
This overestimation can be explained using Figure 6C, which shows the support (posterior frequency) for the two most frequent topologies for each segment along the alignment.
Each matrix stores the frequency for each nucleotide at every position of the putative motif in order to summarize the alignment information for the TF with a binding site.
In order to observe the alignment across frequency bins, the permutation measurement (PM) for a 2×2 case is adopted[28].
Precise identification of NCO GCs relies on accurate detection of homozygous and heterozygous states at polymorphic markers, which in turn depends on two criteria: a reliable short read alignment-based allele frequency threshold for distinguishing between homozygous and heterozygous genotypes, and a sufficient number of aligned sequence reads.
The use of multiple CR filters on a single PS transmission also eliminates the need for frequency alignment between the primary signal and the CR detector.
The frequency distribution of the alignment scores for the 240 base trimmed BESs against the equine and bovine genomes show marked differences.
A total of 140 different EIAV SU variant sequences [42] that overlap the ERRE were used to generate a multiple sequence alignment for computing ribonucleotide covariation frequencies within the ERRE.
The block permutation problem means the separation alignment is different for blocks of frequency bins, which is a different problem from the conventional permutation problem in the frequency domain independent component analysis approaches.
However, despite the reported improvements in BSS performance, additional complexity was introduced due to the extra stage for the alignment of the frequency bin-wise permuted clustering results.
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