Sentence examples for alignment fragment from inspiring English sources

Only if the alignment fragment that had elicited a hit in the screen was found to be detected applying our standard protocol was the remainder subjected to the iterative procedure as described above.

All the other features are motivated by our observation that the unexpressed fragment attractors tend to have smaller number of alignment fragment and shorter region than their corresponding expressed ones.

(λ+ i, K+ i ) for the forward sense and (λ- i, K- i ) for the reverse complementary sense respectively, with i ∈ {0, 1, 2} that are used for evaluating the scores of each alignment fragment within which the reading frame difference is preserved.

This analysis compares the goodness of fit of phylogenies inferred from alignment fragments under the maximum likelihood framework using the corrected Akaike Information Criterion.

We extracted alignment fragments overlapping the putative promoter regions and the in -vivo bound regions.

Inappropriate handling of the multiple alignment fragments impacts the subsequent analysis and may lead to questionable conclusions.

Global meta-alignments (concatenated alignment fragments across all considered genes and across three rate bins, see Methods) of five types (C, A, AN, AI, AC) were used.

A local meta-alignment is a concatenate of all alignment fragments of a fixed type (for example, coding alternative regions) for one particular gene.

After sequence alignment, fragments sized 136 to 401 nucleotides for the atpD, gapA, guaA, nuoD, ppsA, recA and rpoA genes were used for nucleotide diversity and phylogenetic analyses.

In the alignment fragments, each BAC pair anchored by one marker exhibited a very high level of sequence identity, from 90.4% to 99.2%.

At first, 67 alignment fragments were obtained by moving a 300 nucleotide window along the alignment with a step of 50 bases, and neighbor-joining tree of each fragment was constructed by PHYLIP [ 30].