Sentence examples for alignment for testing from inspiring English sources

To ensure comparability of results, we used the 547 MOTUs identified in the original study to build a reference tree and reference alignment for testing the EPA-PTP and EPA-CROP pipelines.

Even with the average reads coverage of 100 used in our simulation, Cuffdiff2 declared that 88 of the 4,247 did not have enough alignments for testing.

This makes them useful for testing alignment, surface reconstruction, and hole filling algorithms.

Additionally, we may be able to agree a skill-set on which to base the development and alignment of assessment tools for testing the safety competencies of GPs, particularly those in training.

A set of protein pairs was used for testing alignments and selected so that there should be some structural similarity, but little sequence similarity.

We have also provided sample SIFT key files and matches for the test images, for testing the alignment routines.

The ease of the alignment protocol will stimulate interest for testing new applications which require a good control of the pore density and morphology (periodicity, and high monodispersity of the pore size distribution).

To find the confidence interval around the test tree, the procedure was repeated but this time the alignment for the test tree was used when getting the log likelihoods.

For the complete alignment we tested for appropriate models of nucleotide substitution using the Akaike Information Criterion (AIC) as implemented in Modeltest [ 42].

Evidence for recombination within each gene family alignment were tested for with the Pairwise Homoplasy Index (PHI) [44] and GARD [40] using nucleotide substitution models selected above and estimating substitution frequencies and a proportion of invariable sites from the data with 4 rate categories in a gamma distribution.

Each alignment was tested for evidence of recombination using two approaches.