The phrase "alignment finally" is correct and usable in written English.
It can be used to indicate that a state of alignment has been achieved after a period of time or effort.
Example: "After numerous discussions and adjustments, we can say that alignment finally has been reached among all team members."
Alternatives: "alignment at last" or "alignment ultimately".
Predefined masking was selected to ensure reproducibility in future alignments, and finally, the alignment was refined with Gblocks (Castresana 2000) allowing 50% in coverage gaps.
In each data set, deduced amino acid sequences were aligned using MAFFT program (Katoh et al. 2002), and the alignment was finally inspected and corrected by eye.
"The old New Deal alignment is finally gone, but as we come into the information age the new lines are not yet settled".
After the seeding procedure has been initiated and the marker traces been identified, the alignment is finally optimized through a bundle adjustment procedure by minimizing a reprojection error.
Generally, various checkpoint mechanisms ensure the high fidelity of DNA replication, DNA repair, chromosome alignment and, finally, division of nucleus and cytoplasm.
This involves a number of highly regulated steps, including activation of myogenic genes, migration, cell cell adhesion and alignment, and finally membrane fusion.
Candidate SV regions are refined through further local alignment, and finally SNPs and small indels are determined using an alignment-based assembly once the genomic sequence is structurally similar and reads that span SV breakpoints are properly aligned.
For each read, SCISSORS uses these hashes to generate candidate alignments and finally applies the SSW to these candidates to obtain the second partial alignment against these insertion sequences (see the right partial alignment to the ME reference shown in the bottom panel of Figure 4).
First comes (A) an introduction to the program; (B) a histogram of expectations if one was requested; (C) a series of one-line descriptions of matching database sequences; (D) the actual sequence alignments, and finally the parameters and other statistics gathered during the search.
With Luisa Miller, however, written for Naples in 1849, Verdi's intellectual alignment with Schiller finally clicked into place.
