Sentence examples for alignment end from inspiring English sources

Existing alleles were translation-aligned between start (alignment start) and stop (alignment end) codons, those containing a frameshift or stop codon were removed, and the modal consensus sequence was exported.

Site-specific Ka/Ks values were culled from the Macropus sequence sites, which reduced the influence of alignment end gaps on the estimates.

We evaluated this effect by estimating the offset from the differences in the local alignment end positions and shifting the mouse promoter as much as the offset.

Once CCS reads are sorted, the pipeline uses Bowtie2's default alignment (end-to-end read alignment) to align reads to the corresponding reference sequence and outputs a set of alignments in SAM format.

Likewise, the score of a best alignment ending in an unconserved (intergenic) region cannot be calculated from the score of a best alignment ending in a conserved region (intron) of the two sequences.

Given this fact, the score of a best alignment ending in a conserved (intronic) region cannot be calculated from the score of a best alignment ending in an unconserved (intergenic) region of the input genomic sequences.

Consequently, the score of a best alignment ending in the first (resp. last) position of the searched gene can only be calculated in the presence of the codon ATG (resp. TAA, TAG, TGA) in both sequences.

Taking this into account, the score of a best alignment ending in the first position of a possible exon (resp. intron) can only be calculated in the presence of the dinucleotides AG (resp. GT) in both sequences.

The new alignment ends a short distance east of the Cove Valley service plaza on the original segment.

The one-way street alignment ends at 11th Avenue South, but quickly begins again as US 30 / US 67 turn to the north onto northbound South Third Street and southbound South Fourth Street.

M-28 was extended along US 2 to the state line at Ironwood, and the eastern end of M-28 through Brimley was moved to a new alignment ending at US 2, in Dafter in 1942.