Sentence examples for alignment efficiency from inspiring English sources

Alignment efficiency (the ratio of uniquely aligned reads to total sequenced reads for each sample) ranged from 26.57% to 93.15% across all samples in this study (Table 1).

In total, 3.67 gigabases (Gb) were sequenced, 2.74 Gb were aligned to the reference genome (average 74.66% alignment efficiency).

Aforementioned studies indicated that the FNN is helpful to improve the alignment efficiency.

The alignment efficiency of ortho-pyroxene was compared with those of various rock-forming minerals.

Depending on species, RNA-seq read alignment efficiency varied from 55 to 99% (Table S2).

This process was iterated over six cycles after which there was no significant gain in alignment efficiency.

Given the different alignment efficiencies of software, clean reads were aligned using TopHat2 [ 74] (v2.0.12) with Bowtie [ 75] (v0.12.9.0) for single-end reads (49 bp) and Bowtie2 [ 76] (v2.1.0.0) for paired-end reads (90 and 150 bp).

Prior to each experiment, the confocal microscope was tested for field illumination alignment, optical efficiency, colocalization, and axial resolution (Lerner and Zucker 2004; Zucker 2006a, 2006b; Zucker and Lerner 2005; Zucker et al. 2007); and the lens was inspected and cleaned before use.

Results: Compared with other aligners, Slider has higher alignment accuracy and efficiency.

We evaluated multiple aligners based on criteria, including application-specific alignment feature, computational efficiency, and alignment accuracy.

We present the study on multiplexed beams automatic alignment of high efficiency excimer laser.