Sentence examples for alignment distance between from inspiring English sources

In practice, DTW first evaluates the local alignment distance between each pair of elements in order to obtain a distance matrix.

The maximum and minimum alignment distances between a read pair are I − l + D and I − l − D, respectively, where l is the read length, assuming the same read length for both members in a pair.

Pearson's R correlation coefficients values between AUC ROC and some helix pair features, i.e. spatial distance (RMSD), sequence alignment distance (dist) and helix contact multiplicity.

For each gene alignment, evolutionary distances between each pair of sequences are calculated with TREE-PUZZLE [ 20].

The region of the locus was extended from the anchored alignment to both ends by using other alignments of the same query sequence meeting the following criteria: (1) the direction of the alignment was identical to that of the anchored alignments; and (2) the distance between the alignment from the region of the locus (which is a possible intron) was less than 1 Mb.

Note the elliptical callus formation, the limb alignment, and the distance between the osteotomy and the pin sites.

The objective function is specifically tuned to finding SV events by taking into account the length and quality of alignments, the number of alignments in the OCS and the genomic distance between those alignments.

After each move, the distance of the newly described cavity descriptor is compared to that of the query, the best alignment having the minimal distance between both cavity fingerprints.

We then compute all pairwise distances (using either the global sequence alignment or k-mer distance) between all pairs of sequences within the OTU.

The dependence of Accuracy and Confidence values of tree types of alignment on the evolutional distance between cores (PAM), relation of the total length of consoles to the core length (Console length r, %) and the ratio of the absolute value of the difference between console lengths to their total length (Core shift c, %) are shown.

Alignments with zero aa distance between human and mouse or human and cow were excluded from the analysis.