Sentence examples for alignment display from inspiring English sources
The physical map, BLAT output files and the largest 17 supercontigs (renamed A to Q) were used to create an alignment display with SyMAP software [18].
The alignment display is highly customisable.
Figure 5 pictures this alignment display, along with two curves overlaying the sequence information.
The expectation value (E-value) cutoff and the number for alignment display were set to 10-10 and 250, respectively.
Moreover, the results from functional similarity-based network alignment display little overlap (<15%) with sequence similarity-based alignment.
The default parameters were used except that E-value cutoff and the number for alignment display were set to 10-5 and 1,000 respectively.
While the overall particle morphologies are similar, the reconstruction resulting from our alignment displays much more uniform densities and clearer particle structures.
Furthermore, the signals of GIWAXD measurements do not change if the samples are set parallel or perpendicular to the direction of incident X-rays and it can be inferred that chain alignment displays a random distribution in the in-plane direction for nanoimprinted P3HT nanograting film.
Multiple sequence alignment displays in the ePlant Molecular Interactions Explorer of the implicit protein model, CDD profile, and query sequences are generated on the server-side with ClustalW [52] using a BLOSUM matrix.
The multiple alignment displayed 924 sites, 66 of which presented alignment gaps.
> In addition to greater coverage, modules identified using function-based alignment displayed higher biological coherence than sequence-based alignment using any of the other methods (Fig. 2a).
