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Ye et al.[14] reported that the ZnO/Si heterojunction exhibits a type II band alignment, determined by the Anderson model.
The coordinates of the LTI were recalculated so that the alignment determined by BLAST was at the center and flanked on each side by a genomic region three times the size of the putative parent protein.
Laser light beams were used for head positioning, with alignment determined by orbitomeatal and sagittal lines.
A comparison of the frequency of sequence alignments, determined by MegaBLAST, between rice coding sequences in TIGR pseudomolecules and annotations vs 4.0 and comprehensive transcript-assembly and methylation-filtered databases from Lolium perenne (ryegrass), Zea mays (maize), Hordeum vulgare (barley), Glycine max (soybean) and Arabidopsis thaliana (thale cress) was undertaken.
First, it is clear that the multi-segment alignments computed by SCOW, COW and Generative Multisegment are superior to the alignments determined by ordinary dynamic time warping and the linear alignment method.
Similarly, the suboptimal alignments (determined by variations of the Temperature parameter) generated by the partition function of Probalign, might as well improved the ability of this program to deal with sequences with non-conserved terminal extensions [ 8].
The strength of each alignment is determined by a scoring function consisting of a sum of all residue-residue contacts.
Preoperative leg alignment was determined by a blinded researcher (PH) on standardized full-leg standing radiographs.
The order of pairwise alignments is determined by a guide-tree representing the phylogenetic relationships between sequences.
The alignment accuracy is determined by a scoring function used to drive sequence-template alignment.
The deleted region was determined by a sequence alignment of TS domains from higher eukaryotes and a conserved core region of the domain was chosen for mutational analysis (Supplementary information, Figure S1A).
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