The phrase "alignment dependence" is correct and usable in written English.
It can be used in contexts discussing how the alignment of certain elements affects their dependence on one another, often in technical or scientific discussions.
Example: "The study revealed a significant alignment dependence in the performance of the system under varying conditions."
Alternatives: "alignment reliance" or "dependence on alignment".
To fully detail the effect of our main condition (α-TMS) in terms of phase alignment and dependence on pre-TMS α-phase (and possibly α-amplitude), we computed the Hilbert transform of the band-pass-filtered (8 12 Hz) signal to obtain instantaneous phase and amplitude time series.
The paper presents the carbon nanotubes (CNTs) alignment and length dependence with respect to the catalyst pattern design, the fabrication of a CNT MEM switch, nanomanipulating a CNT array by FIB and the electrical characterization of the device to evaluate the electrical and mechanical properties of the CNT membrane.
Sequence alignment data, pH dependence of IRI activity of Con A, circular dichroism spectra for Con A and SBA, and circular dichroism spectra of Nisin A (PDF ).
The complexity in choosing aligner settings and the potential for missing alignments makes the case against dependence on primary alignments.
To assess the dependence on alignment depth, we generated paired sub-alignments with varying numbers of sequences for every pair of 50S proteins and recomputed coupling strengths for each sub-alignment.
Two alternative Syntenator multiple gene order alignments of mouse (M), rat (R), human (H) and dog (D) are shown to demonstrate the dependence of the alignment outcome on the alignment order of species.
Kinjo and Nishikawa [45] reported that the log-odds matrices constructed for 18 different levels of sequence identities from structure-based protein alignments have a characteristic dependence on time in the principal components of their eigenspectra.
Although the degree of self-alignment (10 4 10 5) and magnitude of RDCs measured in magnetically aligned RNA is 1 2 orders of magnitude smaller than optimum (10 3), self-alignment has a simple dependence on nucleic acid structure, which could be exploited to understand the effects of motional couplings.
Otu and Sayood [ 70] formally examined C LZ as a new sequence distance measure for phylogenetic tree construction, and demonstrated that its lack of dependence on alignments or evolutionary models was particularly suited for sequences subject to segment-based modifications, including whole mitochondrial genomes of eutherian mammals.
In deciding upon an aligner it is important to consider the alignment quality, ability to align large datasets, speed, dependence on a specific database, cost, and openness of the algorithm.
