Sentence examples for alignment data obtained from inspiring English sources

All of these methods essentially test for a difference between two groups in their underlying distributions of isoform usage; and they all make use of alignment data obtained from the RNA-Seq sequence reads (either single-end reads or paired-end reads).

Taking into account the inevitable errors in the estimation of evolutionary rates and branch lengths in short alignments, the data obtained suggest that the inactivation of the Lnx3 gene occurred during the divergence of marsupials and eutherians or in early eutherians.

For a realistic application, we evaluated the alignment procedure for data obtained from human breath samples.

FAIRE-seq and alignment data were obtained from [ 16].

Phylogenetic data obtained from an alignment implying predominantly insect VFTM sequences, showed that all VKR proteins effectively formed a distinct monophyletical protein clade (about 80% of identity between VKR of insects) which is closely related to GABABR (with a 92% bootstrap score)( Fig 4A).

The data obtained from our alignment algorithm compare favorably with those of an established technique for assessing collagen quantity by viewing wounds stained with picrosirius red under polarized light and suggest that a downstream consequence of C15 treatment appears to be a reduction in the degree of scarring at repair sites.

Its probability density function uses data obtained from the input target template alignment, as well as prior knowledge obtained from a database of structural alignments (Sali and Overington, 1994).

Pesticide usage data obtained from various sources.

Third, we conducted a principal components analysis of the amino acid frequency matrix at all sites of the 21 protein alignment data sets and obtained four major classes (or profiles) of amino acid frequency distribution at sites.

There will soon be many more orthologous At CNSs when usefully diverged Brassicaceae genomes are sequenced and aligned, and when CNSs obtained from multiple alignment data are merged with our pairwise CNS list.

This method was used to obtain quantitative alignment data for complex images of densely cultured neurons.