Sentence examples for alignment data in from inspiring English sources

Visualization is an intuitive way to analyze large-scale alignment data in genomic studies.

They are not suitable for alignment data in metagenomics, which are often interspecies alignments.

We used anatomic (femorotibial) axis alignment data in OAI based on the posterioanterior knee radiographs done with the knee in fixed flexion using the Synaflexer frame [ 21].

However, alignment data in both approaches must be sampled so that each block represents a single genealogy for estimating τ and θ precisely.

To make the process quicker, the annotator can sort the alignment data in different ways, e.g. by utilising a quality value (Q val) based on mutual information and rewards consistent translations with high frequency [ 22].

As a first step, for each gene in each sample, IUTA uses alignment data (in BAM format) to estimate the isoform usage according to the isoform structure from an annotation file.

The data are in alignment data reported in other studies in these animal models, demonstrating that the presence of neoepitopes is a good biochemical marker of pathologies involving excessive ECM remodeling [ 21- 27].

These gene portions cover almost all sequence regions of the alignment data used in two previous molecular phylogenetic studies of microhylids (16S, ncx1, cxcr4, and rag1 [ 2]; cox1, bdnf, tyr, rag1 and rag2 [ 3]), and the amplification primers used here basically followed these studies.

More detailed information of used taxa and sequences in each alignment data are summarized in the Additional file 7. To make these alignments, we initially aligned each gene portion by using MUSCLE [ 17] implemented in SeaView ver. 3.2 [ 18].

The pair-wise alignment data is presented in Additional file 10.

The genome alignment data were deposited in the Dryad online repository (http://dx.doi.org/10.5061/dryad.org/10.5061/dryad