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Varus alignment creates a constant, static adduction moment at the knee resulting in increased loads in the medial compartment and tension on the lateral structures during stance [21].
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Alignment created an architecture that simulated a degree of cell orientation in native ligament tissue.
Three types of alignment were created: A: duplicate sequences from the array were combined with all other gene family members.
During this test each sequence in the training set was excluded, one at a time, an alignment created and a new HMM built.
The spatial charge-density distribution of band-edge states indicate that the smaller-sized GaAs/GaP core-shell nanowires (d < 5 nm) have a pseudo-type I band alignment that creates a stronger confinement for hole carriers but there is a type-I band alignment in larger-sized nanowires where both electrons and holes are localized in the GaAs core.
This alignment creates institutional (discursive) space for community initiatives.
Each record in the Manually Curated PWM section of the database comprises a TFBS training set (alignment) created by an expert curator using published experimental data and manual in silico analyses.
From back-translation of protein alignments, TreeBest creates a consensus tree by merging the results of neighbour joining and maximum likelihood (ML) trees.
In phylogeny reconstruction, the standard bootstrap for sequence data [ 5, 25] samples columns with replacement from a multiple sequence alignment to create a new alignment matrix of identical dimensions.
Besides HHpred and HHalign, HHsenser may be useful here as it allows intermediate HMM-HMM hits in the same framework to cover greater distances in sequence space (e.g. if starting alignment created by HHpred for a query has too few sequences after removing redundancy).
The unrooted tree was generated from an alignment created with MUSCLE [ 45 ], all positions containing gaps and missing data were eliminated.
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